The bioinformatics teams in New York and Abu Dhabi collaborate to provide comprehensive support to the NYU Biology Department and develop interesting projects such as:
NASQAR
Web-based platform for NGS data analysis and visualization
Learn
Comprehensive resource for mastering NGS analysis
TuboWeb
Web-based platform for NGS data analysis and visualization
Shiny
Collection of Shiny apps developed by the NYU Biology community
reform
Modify reference sequence and annotation files quickly and easily
^BADAS*
Bioinformatics and Data Analysis Series
GitHub
Open source and reproducible code repositories
JBrowse
Interactive genomic data visualization for in-depth analysis
For questions, consultation on pipeline development and execution, and
downstream analysis, please email Mohammed Khalfan in New York (mkhalfan@nyu.edu)
or Nizar Drou in Abu Dhabi (nd48@nyu.edu).
Recent Articles
Nextflow & nf-core on NYU HPC
June 12, 2024All nextflow and nf-core pipelines have been successfully configured for use on the HPC Cluster at New York University. The configuration applies required an...
Non fungible tokens (NFTs) for academic publications?
July 21, 2021Being rejected from the preprint server, bioRxiv, seemed like a new low for me. But, I was heartened to know that I was in good company. At least an explanat...
JBrowse Genome Browser
July 27, 2020During the summer of 2020, the Ghedin and Gresham labs at New York University sequenced several SARS-CoV-2 isolates from clinical samples acquired in New Yor...
Contact Us
New York
Mohammed Khalfan
mkhalfan@nyu.edu
Abu Dhabi
Nizar Drou
nd48@nyu.edu